List of 3D course references:

• ``Introductory Techniques for 3-D Computer Vision,'' Trucco and Verri, Chapters 2.2.2, 2.2.3, 2.2.4, 7, Prentice Hall 1998.
• ``Helmholtz Stereopsis: Exploiting Reciprocity for Surface Reconstruction,'' Zickler, Belhumeur, Kriegman, International Journal of Computer Vision 49(2/3):215–227, 2002.
• ``A theory of shape by space carving‏,'' K. N. Kutulakos, S. M. Seitz, International Journal of Computer Vision, 38(3) (2000).
• ``Coplanar Shadowgrams for Acquiring Visual Hulls of Intricate Objects ,'' Yamazaki, Narasimhan, Baker, Kanade, ICCV 2007.
• ``Stereo from flickering caustics,'' Swirski, Schechner, Herzberg and Negahdaripour, ICCV 2009.
• ``Spacetime Stereo: A Unifying Framework for Depth from Triangulation,'' Davis, Ramamoorthi, Rusinkiewicz, CVPR 2003.
• ``Recent progress in coded structured light as a technique to solve the correspondence problem: a survey,'' Battle, Mouaddib, Salvi, Pattern Recognition 31(7):963-982, 1998.
• ``3-D data acquisition by rainbow range finder,'' Tahima, Iwakawa, ICPR 1990.
• ``Rainbow three-dimensional camera: new concept of high-speed three-dimensional vision systems,'' Geng, Optical Engineering, 35(2):376-383, 1996.
• ``A regularized solution of shape from shadows'', Hatzitheodorou, Jackowski, Papageorgiou, CUCS-416-89, 1989.
• ``Three Dimensional Sensors - Potentials and limitations,'' Hausler, Handbook of Computer vision and Applications, Vol.-I, Ch. 19, 485-506, 1999.
• ``Diffuse structured light,'' Nayar, Gupta, ICCP 2012.
• ``Micro phase shifting‏,'' Nayar, Gupta, CVPR 2012.
• ``Structured light 3D scanning in the presence of global illumination‏,'' M. Gupta, A. Agrawal, A. Veeraraghavan, S. G. Narasimhan, CVPR 2011.
• ``MC3D: Motion Contrast 3D Scanning,'' N. Matsuda, O. Cossairt, M. Gupta, ICCP 2015.
• ``Shape from single stripe pattern illumination,'' Winkelbach, Wahl, DAGM 2002.
• ``Phase measuring deflectometry: a new approach to measure specular free-form surfaces,'' Knauer, Kaminski, Hausler, Proc. SPIE Vol. 5457, 367-376, 2004.
• ``Depth from defocus vs. stereo: How different really are they?,'' Schechner, Kiryati, International Journal of Computer Vision 89:141-162, 2000.
• ``Real-time focus range sensor,'' Nayar, Watanabe, Noguchi, IEEE Transactions on Pattern Analysis and Machine Intelligence, 18:1186-1198, 1996.
• ``Depth from Diffusion,'' Zhou, Cossairt, Nayar, CVPR 2010
• ``Wave propagation with rotating intensity distributions,'' Schechner, Piestun, Shamir, Physical Review E. 54, pp. R50-R53, 1996.
• ``Depth from diffracted rotation,'' Greengard, Schechner, Piestun, Optics Letters 31(2):181-183, 2006.
• ``Time-Multiplexed Integral Imaging For 3D Sensing and Display,'' J. Jang and B. Javidi, Opt. Photon. News 15(4), 36-43 (2004).
• ``Single Lens Stereo with a Plenoptic Camera,'' E. H. Adelson and J. Y. A. Wang, IEEE Transactions on Pattern Analysis and Machine Intelligence 14(2), 99-106 (1992).
• ``Light Field Photography with a Hand-held Plenoptic Camera,'' R. Ng, M. Levoy, M. Bredif, G. Duval, M. Horowitz and P. Hanrahan, Stanford University Computer Science Tech Report CSTR 2005-02 (2005).
• ``Light Field Microscopy,'' M. Levoy, R. Ng, A. Adams, M. Footer and M. Horowitz, Proceedings of ACM SIGGRAPH 25(3), 924-934 (2006).
• ``Three-dimensional architecture of a polytene nucleus,'' Agard D. A., Sedat J. W., Nature 21 April 1983. 302(5910): 676-81
• ``Digital reconstruction of three-dimensional serially sectioned optical images,'' Macias Garza F.; Bovik A. C; Diller K. R. Aggarwal S. J. Aggarwal J. K., IEEE Transactions on Acoustics, Speech and Signal Processing. July 1988; 36(7): 1067-75
• ``Three-dimensional imaging by a microscope,'' N. Streibl J. Opt. Soc. Am. A2, 121-127 (1985)
• ``Deep tissue two photon microscopy,'' F. Helmchen and W. Denk, Nature Methods 2, 932 - 940 (2005).
• ``Nonlinear magic: multiphoton microscopy in the biosciences,'' W. R. Zipfel, R. M. Williams and W. W. Webb, Nature Biotechnology 21, 1369 - 1377 (2003).
• ``Method of obtaining optical sectioning by using structured light in a conventional microscope,'' M. A. A. Neil, R. Juskaitis and T. Wilson, Optics letters 22(24), 1905-1907 (1997).
• ``Structure brings clarity: Structured illumination microscopy in cell biology,'' M.F. Langhorst Dr.,J. Schaffer and B. Goetze, Biotechnology Journal 4(6), 858-865 (2009).
• ``Shape-from-shading: a survey,'' R. Zhang; P. S. Tsai, J. E. Cryer and M. Shah, Proc. IEEE PAMI 21(8), 690-706 (1999)
• ``Polarization-based decorrelation of transparent layers: The inclination angle of an invisible surface,'' Y. Y. Schechner, J. Shamir and N. Kiryati, Proc. ICCV, pp. 814-819 (1999).
• ``Polarization-based vision through haze,'' Y. Y. Schechner, S. G. Narasimhan, and S. K. Nayar, Applied Optics 42(3), 511-525 (2003), Special issue about Light and Color in the Open Air
• ``Recovery of underwater visibility and structure by polarization analysis,'' Y. Y. Schechner and N. Karpel, IEEE Journal of Oceanic Engineering 30(3),570-587 (2005)
• ``Regularized image recovery in scattering media,'' Y. Y. Schechner and Y. Averbuch, Proc. IEEE PAMI 29(9), 1655-1660 (2007)
• ``Active polarization descattering,'' T. Treibitz and Y. Y. Schechner, Proc. IEEE PAMI 31(3),385-399 (2009)
• ``Fluorescent Immersion Range Scanning,'' M. B. Hullin, M. Fuchs, I. Ihrke, H. P. Seidel and H. P. A. Lensch, Proc. SIGGRAPH (2008)
• ``Shape from Fluorescence,'' T. Treibitz, Z. Murez, B. G. Mitchell and D. Kriegman, ECCV, 292-306 (2012)
• ``Triangulation in Random Refractive Distortions,'' M. Alterman, Y. Y. Schechner and Y. Swirski, Proc. IEEE ICCP (2013)
• ``STELLA MARIS: Stellar Marine Refractive Imaging Sensor,'' M. Alterman, Y. Swirski and Y. Y. Schechner, Proc. IEEE ICCP (2014)
• ``Depth from Optical Turbulence,'' Y. Tian, S. G. Narasimhan and A. J. Vannevel Proc. IEEE CVPR (2012)
• ``Passive tomography of turbulence strength'' M. Alterman, Y. Y. Schechner, M. Vo and S. G. Narasimhan, Proc. ECCV (2014).
• ``The image processing handbook,'' J. C. Russ, (5ht edition), Sec. 12, CRC Press (2007)
• ``The physics of medical imaging,'' S. Webb, Sec. 4 and 6.7, IOP Publishing Ltd (1988)
• ``Whole-Body Optical Imaging in Animal Models to Assess Cancer Development and Progression,'' E. L. Kaijzel, G. v.d. Pluijm and C. W. G. M. Löwik, Clinical Cancer Research 13(12), 3490-3497 (2007)
• ``Integrated visualization of multi-angle bioluminescence imaging and micro CT,'' P. Kok, J. Dijkstra, C. P. Botha, F. H. Post, E. Kaijzel, I. Que, C. W. G. M. Löwik, J. H. C. Reiber and B. P. F. Lelieveldt, Proc. SPIE 6509, pp. 65091U-65091U-10 (2007)
• ``Imaging the body with diffuse optical tomography,'' D.A. Boas, D. H. Brooks, E. L. Miller, C. A. DiMarzio, M. Kilmer, R. J. Gaudette and Q. Zhang, IEEE Signal Processing Magazine 18(6), 57-75 (2001)
• ``Photoacoustic tomography and microscopy,'' L.V. Wang, Optics and photonics news, 37-41 (2008)
• ``Multi sky-view 3D aerosol distribution recovery,'' A. Aides, Y. Y. Schechner, V. Holodovsky, M. J. Garay and A. B. Davis, Optics Express 21, 25820-25833 (2013)
• ``Airborne three-dimensional cloud tomography,'' A. Levis, Y. Y. Schechner, A. Aides and A. B. Davis, Proc. IEEE ICCV (2015)
• ``Statistical tomography of microscopic life,'' A. Levis, Y. Y. Schechner, R. Talmon, Proc. IEEE CVPR (2018)
• ``X-ray computational tomography through scatter,'' A. Geva, Y. Y. Schechner, J. Chernyak, R. Gupta, Proc. ECCV (2018)
• ``Optics,'' E. Hecht, (4th edition), Sec. 4.6 (The electromagnetic approach), pp. 623-639, Adisson-Wesley (2001)
• ``Determining surface orientations of transparent objects based on polarization degrees in visible and infrared wavelengths,'' D. Miyazaki, M. Saito, Y. Sato, and K. Ikeuchi, J. Opt. Soc. Am. A 19, 687-694 (2002)
• ``Transparent surface modeling from a pair of polarization images,'' D. Miyazaki, M. Kagesawa and K. Ikeuchi, Fellow, IEEE, IEEE TPAMI 26(1), 73-82 (2004)
• ``The Cosmic Distance Ladder,'' T. Tao, http://terrytao.files.wordpress.com/2010/10/cosmic-distance-ladder.pdf
• ``Cosmic distance ladder II: standard candles,'' ASTR 101L, D. Reichart, http://user.physics.unc.edu/~reichart/ASTR101L-5.pdf
• ``Introduction to Fourier optics,'' J. Goodman, (3rd edition), Ch. 9 (Holography), Roberts and Company, (2005)
• ``Phase-shifting digital holography,'' I. Yamaguchi, Optics letters 22(16), 1268-1270 (1997)
• ``Quantitative optical phase microscopy,'' A. Barty, K. Nugent, D. Paganin, and A. Roberts, Optics Letters 23(11), 817-819 (1998).
• ``Quantitative differential phase contrast imaging in an LED array microscope,'' L. Tian and L. Waller, Optics Express 23(9), 11394-11403 (2015)
• ``Single-shot quantitative phase microscopy with color-multiplexed differential phase contrast (cDPC),'' Z. F. Phillips, M. Chen, L. Waller, PLoS One (2017)
• ``Optical systems and processes,'' J. Shamir (1999), Bellingham, Washington: SPIE-The international society for optical engineering, Chapter 8: Interference & interferometers, pp.155-183.
• ``Fundamentals of photonics,'' B. E. A. Saleh and M. C. Teich (2007), (2nd edition), Hoboken, NJ: J. Wiley & Sons Inc. publications, Chapter 11: Statistical optics, pp. 403-423.
• ``White light interferometry,'' J. C. Wyant, Proc. SPIE 4737, Holography: A Tribute to Yuri Denisyuk and Emmett Leith, 98 (July 9, 2002); doi:10.1117/12.474947, 98-107.
• ``Three-dimensional sensing of rough surfaces by coherence radar,'' T. Dresel, G. Hausler, and H. Venzke, Applied Optics 31(7), 919-925 (1992).
• ``Optical coherence tomography by spectral radar: improvement of signal-to-noise ratio,'' P. Andretzky, M. Knauer, F. Kiesewetter and G. Haeusler, Proc. SPIE 55, 55-59 (2000)
• ``Dynamic Heterodyne Interferometry,'' T. Maeda, A. Kadambi, Y. Y. Schechner and R. Raskar, Proc. ICCP (2018)